BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014B11LP1|AL426648
(674 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1634 829 0.0
>3x_Contig1634
Length = 14275
Score = 829 bits (412), Expect = 0.0
Identities = 476/502 (94%), Gaps = 6/502 (1%)
Strand = Plus / Minus
Query: 173 ggacagtatgttagatcatctkcmatgatcacagcggggsaatcattctcacatgttgtg 232
||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct: 6727 ggacagtatgttagatcatctgcaatgatcacagcggggcaatcattctcacatgttgtg 6668
Query: 233 aaggtaacaaagaactctgaccacactcttgtcacgtccggsatatattcaaagagtagg 292
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 6667 aaggtaacaaagaactctgaccacactcttgtcacgtccggcatatattcaaagagtagg 6608
Query: 293 catcccagttacyttggattcttttgcgtgcgcgctgttggctcgccgcacaaygctgtc 352
|||||||||||| ||||||||||||| | | |||||||||||| || || |||||
Sbjct: 6607 catcccagttactttggattcttttg---gtggtctgttggctcgcagct-aatgctgtt 6552
Query: 353 aaatccagtttcattggtcatttttattgtygktttatggaaattcttcaatagtagaat 412
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 6551 aaatccagtttcattggtcatttttattgtcgttttatggaaattcttcaatagtagaat 6492
Query: 413 tkcattygaagaaagatacctcgtgcagtttttcgggaatcagtacataacgtacagggr 472
| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6491 tgcattcgaagaaagatacctcgtgcagtttttcgggaatcagtacataacgtacaggga 6432
Query: 473 aactgtaggagttggtattcccttcatcaaatagaatagccatttcttttcggtttggtg 532
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6431 aactgtaggagttggtattcccttcatcaaatagaatagccatttcttttcggtttggt- 6373
Query: 533 agttgtaacagtaaaaatcacaatattgtatatkaatgatttatgaagttttrtgtatat 592
|||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||
Sbjct: 6372 agttgtaacagtaaaaat-acaatattgtatatgaatgatttatgaagttttatgtatat 6314
Query: 593 actttatgcagttcatactaaaacttaacgtaatccttgtagaatgttaatcggrggtca 652
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 6313 actttatgcagttcatactaaaacttaacgtaatccttgtagaatgttaatcggaggtca 6254
Query: 653 agtcgatcaaatcgtcagaatt 674
||||||||||||||||||||||
Sbjct: 6253 agtcgatcaaatcgtcagaatt 6232
Score = 127 bits (63), Expect = 3e-29
Identities = 107/116 (92%), Gaps = 6/116 (5%)
Strand = Plus / Minus
Query: 1 ttgataaacaacggtgtcgggtactttttcgcgcccatycgcgttcgcactgatagagac 60
||||||||||||||||||||||||||||| || |||| || ||| ||||||||||||||
Sbjct: 6879 ttgataaacaacggtgtcgggtactttttggc--ccattcg-gtt-gcactgatagagac 6824
Query: 61 aatcacagaacgccttctatatcccgctcgttcaaatctacaacctattcctttta 116
||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 6823 aatcatagaacgccttctat-tcccg-tcgttcaaatctacaacctattcctttta 6770
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3502
Number of Sequences: 1807
Number of extensions: 3502
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 674
length of database: 10,358,551
effective HSP length: 16
effective length of query: 658
effective length of database: 10,329,639
effective search space: 6796902462
effective search space used: 6796902462
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)